STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1564Putative phospholipid/glycerol acyltransferase transmembrane protein. (635 aa)    
Predicted Functional Partners:
RSc0442
Putative fatty-acid--coa ligase transmembrane protein.
  
 
 0.909
fadD2
Probable long-chain-fatty-acid--coa ligase protein.
  
 
 0.909
fadD1
Probable long-chain-fatty-acid--coa ligase protein.
  
 
 0.909
alkK
Probable acyl-coa synthetase protein.
  
 
 0.822
RSp1434
Putative acyl-coa synthetases(amp-forming) protein.
  
 
 0.761
RSp0641
Probable non ribosomal peptide synthetase protein.
   
 
 0.551
RSc1565
Putative fkbp-type peptidyl-prolyl cis-trans isomerase signal peptide protein.
       0.528
RSc1563
Probable cystathionine-beta-synthase domain harboring protein.
       0.522
RSc1806
Probable polyketide synthase protein.
  
 
 0.487
RSc0786
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
   
 0.484
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.