STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc1565Putative fkbp-type peptidyl-prolyl cis-trans isomerase signal peptide protein. (141 aa)    
Predicted Functional Partners:
bamA
Putative outer membrane signal peptide protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.817
RSc3104
Probable calcium-binding signal peptide protein.
   
 0.801
comL
Probable dna uptake lipoprotein transmembrane; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.785
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
 0.773
bamB
Putative quinonprotein alcohol dehydrogenase-like transmembrane; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.
   
 
 0.698
lysC
Probable aspartate kinase protein; Belongs to the aspartokinase family.
    
   0.688
ppiB
Probable peptidyl-prolyl cis-trans isomerase b (ppiase b) (rotamase b)(cypb protein); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
 
 0.665
htpG
Probable chaperone protein htpg (heat shock protein htpg) (high temperatureprotein g); Molecular chaperone. Has ATPase activity.
   
 0.659
RSc3436
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
 0.659
pyrH
Probable uridylate kinase (uk) (uridine monophosphate kinase) (umpkinase) protein; Catalyzes the reversible phosphorylation of UMP to UDP.
 
 
    0.657
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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