Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc1569Putative transcription regulator protein. (181 aa)    
Predicted Functional Partners:
lpsI
Probable fesuccinyl-coa:3-ketoacid-coenzyme a transferase subunit a protein.
       0.562
lpsJ
Probable succinyl-coa:3-ketoacid-coenzyme a transferase subunit b protein.
       0.551
RSc1598
Probable two-component transmembrane sensor histidine kinase transcription regulator protein.
 
 
 0.531
RSc2765
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.506
RSc0827
Hypothetical protein of unknown function duf900.
  
     0.487
RSc3079
Probable composite two component regulatory (sensor histidine kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.475
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.475
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
  
     0.472
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
   
 
 0.470
RSc1572
Probable d-beta-hydroxybutyrate dehydrogenase (bdh) oxidoreductase protein.
       0.459
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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