STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1606Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (323 aa)    
Predicted Functional Partners:
RSc1961
Putative aaa atpase; protein.
 
 
 0.801
RSc1607
Probable transmembrane protein.
   
   0.782
RSp0431
Putative amine oxidase; oxidoreductase protein.
  
 0.766
RSc3151
Putative tryptophan 2-monooxygenase oxidoreductase protein.
   
 0.735
RSc3358
Putative set domain protein; Miscellaneous; hypothetical/global homology.
  
 0.735
cobB-2
Putative nad-dependent protein deacetylase; NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form; Belongs to the sirtuin family. Class III subfamily.
    
 
 0.619
htpG
Probable chaperone protein htpg (heat shock protein htpg) (high temperatureprotein g); Molecular chaperone. Has ATPase activity.
    
 0.603
RSc3436
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.603
RSc1144
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.550
RSc0130
Putative cbs-domain-containing membrane transmembrane protein.
  
  
 0.470
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.