STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1608Putative nitroreductase oxidoreductase protein. (235 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.618
RSc2019
Putative phenylacetic acid degradation-related signal peptide protein.
 
    0.579
RSp0693
Putative lactoylglutathione lyase and related lyases protein.
 
    0.509
alkK
Probable acyl-coa synthetase protein.
 
 
   0.450
RSc1806
Probable polyketide synthase protein.
  
 
 0.447
RSc3402
Probable transmembrane protein.
  
  
 0.447
RSc0165
Probable abc-type multidrug transport system, permease component abc transporter protein.
  
  
 0.441
RSc1975
Putative transmembrane permease abc transporter protein.
  
  
 0.441
RSc2955
Putative abc-type multidrug transport system, permease component abc transporter protein.
  
  
 0.441
RSp1474
Miscellaneous; hypothetical/partial homology.
  
     0.439
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.