STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1611Hypothetical protein of unknown function duf224. (241 aa)    
Predicted Functional Partners:
RSc1612
Putative uncharacterized conserved protein containing a ferredoxin-like domain.
 
 0.998
glcD
Probable glycolate oxidase (fad-linked subunit) oxidoreductase protein.
  
 0.938
RSc1032
Putative transmembrane protein.
 
 
 0.915
sdhB
Putative succinate dehydrogenase (iron-sulfur subunit) oxidoreductase protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.
 
 
   0.915
dld
Putative d-lactate dehydrogenase (cytochrome) oxidoreductase protein.
  
 0.892
glcG
Probable glcg protein.
  
  
 0.726
RSc1613
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.642
glcE
Probable glycolate oxidase subunit oxidoreductase protein.
  
 0.609
RSc2376
Putative ferredoxin protein.
  
  
 0.523
RSc1614
Probable transmembrane protein.
       0.500
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.