STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1624Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (253 aa)    
Predicted Functional Partners:
tolR
Putative tolr-related transport transmembrane protein.
  
 
 0.746
exbD1
Probable biopolymer transport transmembrane protein.
  
 
 0.746
exbD2
Probable biopolymer transport exbd-related transmembrane protein.
  
 
 0.746
RSc0152
Probable lipoprotein.
  
 
 0.661
RSp0244
Probable outer membrane hemin receptor signal peptide protein.
  
 
 0.661
RSc1625
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.650
tolQ
Probable tolq-related transport transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.643
exbB1
Probable biopolymer transport transmembrane protein.
  
 
 0.643
exbB2
Probable biopolymer transport exbb-like transmembrane protein.
  
 
 0.643
tex
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.539
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.