STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phbCProbable poly-beta-hydroxybutyrate polymerase transmembrane protein. (598 aa)    
Predicted Functional Partners:
phbB
Probable acetoacetyl-coa reductase oxidoreductase protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.994
phaZ
Probable poly[d(-)-3-hydroxybutyrate] depolymerase protein.
 
  
 0.991
phbA
Probable acetyl-coa acetyltransferase (acetoacetyl-coa thiolase) protein; Belongs to the thiolase-like superfamily. Thiolase family.
 
  
 0.919
RSc1634
Putative pha accumulation regulator dna-binding protein.
 
   
 0.891
RSc2551
Putative predicted esterase of the alpha-beta hydrolase superfamily protein.
 
   
 0.730
RSc1573
Putative hydrolase protein.
 
  
 0.703
RSp1060
Putative cog1752, predicted esterase of the alpha-beta hydrolase superfamily transmembrane protein.
 
   
 0.632
RSp0790
Putative predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) protein.
 
  
 0.607
phaP2
Probable polyhydroxybutyrate granule-associated protein (phasin) phap2.
 
  
 0.559
RSc1630
Probable transmembrane protein.
       0.553
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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