STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
risSTwo-component system, OmpR family, osmolarity sensor histidine kinase EnvZ; Probable oxidative stress resistance two-component transmembrane sensor histidine kinase transcription regulator protein. (453 aa)    
Predicted Functional Partners:
risA
Two-component system, OmpR family, phosphate regulon response regulator OmpR; Probable oxidative stress resistance two-component response regulator transcription regulator protein.
 0.994
RSp1196
Probable two component response regulator transcription regulator protein.
 0.984
RSp1195
Probable two component transmembrane sensor kinase transcription regulator protein.
  
  
 
0.927
lpdA
Probable dihydrolipoamide dehydrogenase (e3 component of pyruvate and 2-oxoglutarate dehydrogenases complexes) protein.
    
 0.840
rcsC
Probable capsular synthesis regulatory (two-component sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 0.777
ahpC2
Putative alkyl hydroperoxide reductase (subunit c) oxidoreductase protein; EC_number 1.6.4.-.
  
 
 0.750
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
 
     0.741
RSc0550
Probable response regulator transcription regulator protein.
 
 0.723
RSp1676
Probable composite two-component regulatory (sensor kinase and response regulator hybrid) transcription regulator protein.
 
 
 
 0.715
phoB
Probable phosphate regulon two-component response regulator transcription regulator protein.
 
 0.701
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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