STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TIS1421aTis1421-transposase orfa protein. (134 aa)    
Predicted Functional Partners:
TIS1421b
Tis1421-transposase orfb protein.
     0.942
TIS1421b-2
Tis1421-transposase orfb protein.
 
     0.767
TIS1421b-3
Tis1421-transposase orfb protein.
 
     0.767
TIS1421a-4
Tis1421-transposase orfa protein.
 
     0.767
TIS1421b-4
Is1421-transposase orfb protein.
 
     0.767
tIS1421b
Tis1421-transposase orfb protein.
 
     0.767
RSp0102
Probable transposase protein.
 
     0.749
RSc1673
Hypothetical protein; Miscellaneous; unknown.
       0.746
RSc1670
Hypothetical protein; Miscellaneous; unknown.
       0.609
kdpA
Potassium-transporting ATPase potassium-binding subunit; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.
      
 0.531
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.