STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1680Probable phage phi-105 holin-like protein. (124 aa)    
Predicted Functional Partners:
RSc1682
Probable phage phi-105 orf25-like protein.
 
  
 0.851
RSc1684
Probable phage phi-c31 gp36-like protein.
 
   
 0.810
RSc0845
Putative dna modification methylase protein.
 
  
 0.806
RSp0571
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.749
RSp0570
Hypothetical protein; Small molecule metabolism.
 
    0.747
RSc1683
Probable phage phi-105 orf26-like protein.
 
     0.735
RSc0844
Putative dna modification methylase protein; Belongs to the N(4)/N(6)-methyltransferase family.
 
  
 0.733
traG
Probable plasmid conjugation trag transmembrane protein.
   
 
 0.687
RSc1679
Hypothetical protein; Miscellaneous; unknown.
       0.453
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
  
    0.420
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.