STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1689Conserved hypothetical protein; Miscellaneous; hypothetical/global homology. (217 aa)    
Predicted Functional Partners:
RSc1686
Probable phage hk022 gp9-related protein.
       0.644
RSc1688
Miscellaneous; hypothetical/partial homology.
       0.636
RSc1687
Miscellaneous; hypothetical/partial homology.
       0.606
RSc1685
Putative bacteiophage-related protein.
       0.592
RSc1684
Probable phage phi-c31 gp36-like protein.
       0.541
RSc1682
Probable phage phi-105 orf25-like protein.
     
 0.537
RSc1681
Hypothetical transmembrane protein.
       0.495
RSc1683
Probable phage phi-105 orf26-like protein.
       0.495
cpaE1
Putative pilus assembly protein.
  
  
 0.478
cpaE2
Probable pilus assembly protein.
  
  
 0.478
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.