STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1690Probable phage hk97 tail length tape measure-related protein. (957 aa)    
Predicted Functional Partners:
RSc1695
Probable phage hk022 gp19-related protein.
  
  
 0.938
RSc1691
Probable phage hk97 gp17-related protein.
  
  
 0.934
RSc1694
Probable phage hk022 gp18-related protein.
  
    0.932
RSc1696
Probable phage hk022 gp20-related protein.
  
    0.929
RSc1698
Probable bacteriophage protein.
 
    0.919
RSc1692
Probable phage tail collar protein.
 
  
 0.841
RSc1693
Putative tail fiber assembly protein homolog.
  
    0.823
RSp0766
Probable transmembrane protein.
  
    0.658
RSc1924
Probable phage-related protein (baseplate assembly-like protein).
 
    0.517
RSc0853
Probable bacteriophage-related protein.
 
    0.486
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (14%) [HD]