STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1691Probable phage hk97 gp17-related protein. (112 aa)    
Predicted Functional Partners:
RSc1694
Probable phage hk022 gp18-related protein.
  
   0.986
RSc1695
Probable phage hk022 gp19-related protein.
  
  
 0.979
RSc1696
Probable phage hk022 gp20-related protein.
  
   0.971
RSc1690
Probable phage hk97 tail length tape measure-related protein.
  
 
 0.961
RSc1698
Probable bacteriophage protein.
  
   0.944
RSc0873
Putative bacteriophage-related transmembrane protein.
  
 
 0.848
RSc1692
Probable phage tail collar protein.
  
  
 0.816
RSc1693
Putative tail fiber assembly protein homolog.
  
    0.811
RSp0766
Probable transmembrane protein.
  
    0.695
RSc1658
Probable jamm isopeptidase protein.
  
  
 0.477
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.