STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1693Putative tail fiber assembly protein homolog. (198 aa)    
Predicted Functional Partners:
RSc1690
Probable phage hk97 tail length tape measure-related protein.
  
    0.830
RSc1692
Probable phage tail collar protein.
  
  
 0.821
RSc1694
Probable phage hk022 gp18-related protein.
  
    0.813
RSc1691
Probable phage hk97 gp17-related protein.
  
    0.811
RSc1695
Probable phage hk022 gp19-related protein.
  
    0.808
RSc1696
Probable phage hk022 gp20-related protein.
  
    0.808
RSc1922
Probable tail-related protein (tail formation-like protein).
  
  
 0.614
RSc1921
Putative tail fiber-related protein.
  
  
 0.593
RSc1917
Probable phage-related protein (major tail tube-like protein).
  
  
 0.581
RSc1918
Probable phage-related protein (tail sheath-like protein).
  
  
 0.550
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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