STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1694Probable phage hk022 gp18-related protein. (233 aa)    
Predicted Functional Partners:
RSc1695
Probable phage hk022 gp19-related protein.
 
  
 0.984
RSc1696
Probable phage hk022 gp20-related protein.
 
  
 0.978
RSc1691
Probable phage hk97 gp17-related protein.
  
    0.935
RSc1690
Probable phage hk97 tail length tape measure-related protein.
  
    0.932
RSc1698
Probable bacteriophage protein.
 
  
 0.902
RSc1692
Probable phage tail collar protein.
  
    0.818
RSc1693
Putative tail fiber assembly protein homolog.
  
    0.813
RSc0873
Putative bacteriophage-related transmembrane protein.
  
    0.716
RSp0766
Probable transmembrane protein.
  
    0.666
RSc1140
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
   
    0.497
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.