STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1718Probable atp-binding abc transporter protein. (236 aa)    
Predicted Functional Partners:
RSp1465
Probable abc-type transport system, permease component abc transporter protein.
     0.943
RSc0165
Probable abc-type multidrug transport system, permease component abc transporter protein.
 
      0.884
RSc1717
Probable esterase signal peptide protein.
 
     0.878
RSc1382
Probable transmembrane abc transporter protein.
 
      0.862
dppC1
Probable dipeptide transport system permease transmembrane protein.
 
      0.858
dppC2
Probable dipeptide transmembrane abc transporter protein.
 
      0.808
RSc3409
Probable amino-acid transmembrane abc transporter protein.
 
      0.757
RSc2037
Probable atp-binding abc transporter protein.
 
    
0.708
RSc2091
Probable cog3127, predicted abc-type transport system involved in lysophospholipase l1 biosynthesis, permease component abc transporter protein.
 
     0.697
RSp1144
Probable abc-type molybdate transport system, permease component abc transporter protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
      0.694
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.