STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1728Putative fe-s oxidoreductase oxidoreductase protein. (491 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.607
nosR
Probable transmembrane regulatory nosr transcription regulator protein.
  
  
 0.573
RSc1252
Putative nitrous oxide reductase, n-terminal; signal peptide protein.
  
  
 0.546
RSc1727
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.529
norB
Probable nitric oxide reductase (subunit b) transmembrane protein.
  
  
 0.477
RSc1806
Probable polyketide synthase protein.
 
  
 0.465
RSc3255
Putative cytochrome c transmembrane protein.
  
  
 0.443
nosZ
Probable nitrous-oxide reductase precursor (n(2)or) (n2oreductase). oxidoreductase protein; Nitrous-oxide reductase is part of a bacterial respiratory system which is activated under anaerobic conditions in the presence of nitrate or nitrous oxide; Belongs to the NosZ family.
   
  
 0.430
RSc1726
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
       0.429
etf
Probable electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
     
 0.405
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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