STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
potAProbable atp-binding abc transporter protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system. (363 aa)    
Predicted Functional Partners:
RSc1732
Putative binding-protein-dependent transport systems inner membrane component abc transporter.
 
 0.998
RSc1731
Probable transmembrane abc transporter protein.
 
 0.996
RSc1733
Probable bacterial extracellular solute-binding, family 1; signal peptide protein.
 0.995
RSc1793
Probable permease transmembrane abc transporter protein.
 
 0.983
RSc1792
Probable transport system permease transmembrane abc transporter protein.
 
  
 0.929
RSc1791
Probable solute-binding periplasmic (pbp) abc transporter protein.
  
 
 0.922
RSc1794
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
  
  
 
0.911
RSc2938
Putative transmembrane abc transporter protein.
 
 
 0.799
RSp1144
Probable abc-type molybdate transport system, permease component abc transporter protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
   
 0.614
treA
Probable periplasmic alpha,alpha-trehalase signal peptide protein; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system.
   
  
 0.588
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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