STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1735Probable two-component transmembrane sensor kinase transcription regulator protein. (471 aa)    
Predicted Functional Partners:
RSc1736
Probable two-component response regulator transcription regulator protein.
 
 0.995
RSc2935
Putative response regulator transcription regulator protein.
 
 0.982
RSc3392
Probable response regulator transcription regulator protein.
 
 0.982
RSc2934
Probable bacterial extracellular solute-binding, family 1; abc transporter protein.
     0.968
RSc2937
Putative periplasmic iron-binding signal peptide protein.
     0.964
RSc2936
Putative transmembrane sensor kinase transcription regulator protein.
  
  
 
0.915
RSc0550
Probable response regulator transcription regulator protein.
 
 
 0.828
RSp1554
Probable two-component response regulator transcription regulator protein.
 
 
 0.826
RSc3404
Probable response regulator transcription regulator protein.
 
 
 0.825
RSp0523
Putative two component response regulator transcription regulator protein.
 
 
 0.798
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.