STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1745Putative transcription regulator protein; Belongs to the BolA/IbaG family. (94 aa)    
Predicted Functional Partners:
RSc2904
Putative ipr004480 glutaredoxin-related protein; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 
 0.981
ispZ
Probable intracellular septation. transmembrane protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
 
    0.851
RSc2954
Probable transcription regulator protein; Belongs to the BolA/IbaG family.
 
   
 0.787
msrB
Probable peptide methionine sulfoxide reductase related protein; Belongs to the MsrB Met sulfoxide reductase family.
  
    0.771
grxC
Probable glutaredoxin 3 (grx3) protein; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.
 
 
 0.627
RSc1744
Putative isomerase rotamase signal peptide protein.
  
    0.609
RSc0902
Probable signal peptide protein.
  
    0.557
selO
Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation).
       0.557
dps
Putative dna protection during starvation or oxydative stress transcription regulator protein; Belongs to the Dps family.
   
    0.495
RSc2893
Putative oxidoreductase protein.
 
 
   0.466
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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