STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
selOConserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). (525 aa)    
Predicted Functional Partners:
nuoG
Probable nadh dehydrogenaseI(chain g) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
 
      0.894
msrB
Probable peptide methionine sulfoxide reductase related protein; Belongs to the MsrB Met sulfoxide reductase family.
     
 0.713
RSc1745
Putative transcription regulator protein; Belongs to the BolA/IbaG family.
       0.643
ispZ
Probable intracellular septation. transmembrane protein; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.
       0.643
RSc1744
Putative isomerase rotamase signal peptide protein.
 
 
   0.536
RSc2399
Probable transmembrane abc transporter protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
      0.453
htpG
Probable chaperone protein htpg (heat shock protein htpg) (high temperatureprotein g); Molecular chaperone. Has ATPase activity.
      
 0.438
livM
Probable amino acid transport system permease lipoprotein transmembrane; Belongs to the binding-protein-dependent transport system permease family.
       0.417
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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