STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1770Putative hydrolase /ayltransferase (alpha/beta hydrolase superfamily) protein. (311 aa)    
Predicted Functional Partners:
RSp0641
Probable non ribosomal peptide synthetase protein.
  
 
 0.692
RSc1769
Probable oxidoreductase dehydrogenase signal peptide protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.691
RSc1766
Probable nadp-dependent oxidoreductase oxidoreductase protein.
 
    0.686
gstG
Probable glutathione s-transferase protein.
 
     0.668
RSc1767
Putative epimerase/aldolase protein.
 
     0.513
RSc2016
Putative aminoglycoside phosphotransferase protein.
 
   
 0.503
RSc1810
Probable polyketide synthase protein.
 
 
 0.502
RSp1123
Probable kog1208, dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) oxidoreductase protein.
  
   0.471
apaH
Bis(5'-nucleosyl)-tetraphosphatase, symmetrical; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.
    
  0.452
RSc2020
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
   0.451
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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