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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1792Probable transport system permease transmembrane abc transporter protein. (282 aa)    
Predicted Functional Partners:
RSc1791
Probable solute-binding periplasmic (pbp) abc transporter protein.
 
  
  0.995
RSc1794
Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
 
  
  0.994
RSc1793
Probable permease transmembrane abc transporter protein.
 
 
 
0.985
cpdA
Putative phosphohydrolase or metallophosphoesterase protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
 
     0.931
potA
Probable atp-binding abc transporter protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
  0.928
RSc1732
Putative binding-protein-dependent transport systems inner membrane component abc transporter.
 
 
  0.923
RSc1731
Probable transmembrane abc transporter protein.
 
 
 
0.922
RSc1733
Probable bacterial extracellular solute-binding, family 1; signal peptide protein.
   
 
  0.902
modA
Putative molybdate-binding periplasmic signal peptide protein.
 
 
 0.865
cysA
Sulfate/thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.
 
  
 0.863
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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