STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1794Probable atp-binding abc transporter protein; Belongs to the ABC transporter superfamily. (359 aa)    
Predicted Functional Partners:
RSc1793
Probable permease transmembrane abc transporter protein.
 
 0.997
RSc1792
Probable transport system permease transmembrane abc transporter protein.
 
  
  0.994
RSc1791
Probable solute-binding periplasmic (pbp) abc transporter protein.
 
 0.991
RSc1731
Probable transmembrane abc transporter protein.
 
 0.986
RSc1732
Putative binding-protein-dependent transport systems inner membrane component abc transporter.
 0.983
RSc1733
Probable bacterial extracellular solute-binding, family 1; signal peptide protein.
 
 
 0.970
RSp1144
Probable abc-type molybdate transport system, permease component abc transporter protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
 0.933
RSc0165
Probable abc-type multidrug transport system, permease component abc transporter protein.
 
 
 
  0.928
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
   
0.919
potA
Probable atp-binding abc transporter protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
  
  
 
0.911
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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