STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1805Putative siderophore-like synthase protein. (387 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
 
  
 0.968
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
  
 0.955
RSc1806
Probable polyketide synthase protein.
 
  
 0.947
RSc1811
Putative siderophore synthetase protein.
  
 0.906
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.640
RSp0100
Putative ferrisiderophore receptor protein.
      
 0.630
RSp0422
Probable siderophore synthetase component protein.
      
 0.630
RSc2920
Putative hydroxamate-type ferrisiderophore receptor signal peptide protein.
   
  
 0.621
RSp0642
Probable non ribosomal peptide synthetase protein.
  
  
 0.620
RSc0421
Putative multidrug-efflux transporter transmembrane protein.
      
 0.550
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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