STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1805Putative siderophore-like synthase protein. (387 aa)    
Predicted Functional Partners:
RSp1422
Putative peptide synthetase protein.
  
 0.978
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
  
 0.960
RSc1806
Probable polyketide synthase protein.
 
  
 0.947
RSc1811
Putative siderophore synthetase protein.
  
 0.892
ampG
Transport transmembrane protein.
  
  
 0.700
RSp0641
Probable non ribosomal peptide synthetase protein.
 
  
 0.636
RSp0422
Probable siderophore synthetase component protein.
      
 0.626
RSp0100
Putative ferrisiderophore receptor protein.
      
 0.616
RSp0642
Probable non ribosomal peptide synthetase protein.
  
  
 0.607
RSc2920
Putative hydroxamate-type ferrisiderophore receptor signal peptide protein.
   
  
 0.589
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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