STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1808Probable composite atp-binding transmembrane abc transporter protein. (618 aa)    
Predicted Functional Partners:
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
  
 
0.980
RSc3408
Probable atp-binding abc transporter protein.
 
    
0.905
metN
Probable atp-binding abc transporter protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.896
upgC
Probable sn-glycerol-3-phosphate transport atp-binding abc transporter protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
    
0.815
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 
    
0.802
hscC
Probable chaperone transmembrane protein; Belongs to the heat shock protein 70 family.
  
 0.761
dnaK
Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family.
  
 0.758
RSc1806
Probable polyketide synthase protein.
 
 0.755
RSp1422
Putative peptide synthetase protein.
 
  
 0.749
RSp0641
Probable non ribosomal peptide synthetase protein.
 
 
 0.742
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.