STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1808Probable composite atp-binding transmembrane abc transporter protein. (618 aa)    
Predicted Functional Partners:
RSc3408
Probable atp-binding abc transporter protein.
 
    
0.906
metN
Probable atp-binding abc transporter protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
 
    
0.896
upgC
Probable sn-glycerol-3-phosphate transport atp-binding abc transporter protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
    
0.816
RSc1809
Probable composite atp-binding transmembrane abc transporter protein.
 
    
0.810
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 
    
0.802
RSc1806
Probable polyketide synthase protein.
 
 0.777
RSc1810
Probable polyketide synthase protein.
 
 0.763
hscC
Probable chaperone transmembrane protein; Belongs to the heat shock protein 70 family.
  
 0.746
RSp1422
Putative peptide synthetase protein.
  
 0.746
dnaK
Probable chaperone protein dnak (heat shock protein 70) (heat shock 70 kdaprotein) (hsp70); Acts as a chaperone.; Belongs to the heat shock protein 70 family.
  
 0.742
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.