STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1810Probable polyketide synthase protein. (2380 aa)    
Predicted Functional Partners:
fabD
Probable malonyl coa-[acyl-carrier-protein] transacylase.
 0.999
RSp1422
Putative peptide synthetase protein.
 
 0.999
RSc1806
Probable polyketide synthase protein.
 
0.998
RSp0641
Probable non ribosomal peptide synthetase protein.
 
0.998
RSp0642
Probable non ribosomal peptide synthetase protein.
 
 0.998
RSc1811
Putative siderophore synthetase protein.
 
 
0.997
RSc1804
Putative peptide synthase with thioesterase and phosphopantetheinyl transferase domains protein; Belongs to the P-Pant transferase superfamily.
 
 0.993
RSp1419
Putative peptide synthase protein.
 0.993
RSp1434
Putative acyl-coa synthetases(amp-forming) protein.
 0.973
nuoC
Probable nadh dehydrogenaseI(chain c) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
 0.963
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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