Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RSc1821Transcription regulator protein. (147 aa)    
Predicted Functional Partners:
nagL
Probable glutathione s-transferase protein.
 
   
 0.683
nagAa
Probable ferredoxin oxidoreductase oxidoreductase protein.
      
 0.631
RSp0614
Probable reductase; oxidoreductase protein.
   
  
 0.549
leuB2
Probable 3-isopropylmalate dehydrogenase oxidoreductase protein.
      
 0.548
RSc1823
Hypothetical protein; Small molecule metabolism.
  
    0.539
maiA
Probable maleate cis-trans isomerase protein; Catalyzes cis-trans isomerization of the C2-C3 double bond in maleate to yield fumarate.
       0.538
RSc1828
Putative indolepyruvate:ferredoxin oxidoreductase oxidoreductase protein.
 
    0.481
RSp0701
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.450
RSp0702
Putative 2-polyprenyl-6-methoxyphenol hydroxylase and related fad-dependent oxidoreductases oxidoreductase protein.
  
    0.448
speH
Probable s-adenosylmethionine decarboxylase related transmembrane protein; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.
      
 0.432
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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