STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1850Hypothetical transmembrane protein. (164 aa)    
Predicted Functional Partners:
RSc1851
Putative transcription regulator protein.
 
  
 0.794
RSc1547
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
     0.564
RSc1849
Putative transcription regulator protein.
  
  
 0.518
RSp0641
Probable non ribosomal peptide synthetase protein.
     
 0.461
RSp1029
Putative transmembrane acyl-coa desaturase (fatty acid desaturase) oxidoreductase protein.
  
     0.450
pglA
Polygalacturonase precursor (pga) (pectinase). signal peptide protein; Contributes to the wilt disease production on tomato; Belongs to the glycosyl hydrolase 28 family.
  
     0.427
RSp1137
Putative rhs-related transmembrane protein.
  
     0.425
RSp1416
Probable transmembrane protein.
  
     0.418
RSp0881
Putative glycosyl hydrolase transmembrane protein.
  
     0.409
RSp1650
Probable cog5662, predicted transmembrane transcriptional regulator (anti-sigma factor) transcription regulator protein.
 
     0.400
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.