STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1854Putative outer membrane multidrug resistance lipoprotein. (475 aa)    
Predicted Functional Partners:
RSc1853
Probable multidrug resistance transmembrane protein.
 
 
 0.932
RSc1852
Probable multidrug resistance transmembrane protein; Belongs to the major facilitator superfamily.
 
   0.827
emrA
Probable multidrug resistance a (translocase) transmembrane protein.
 
 0.733
acrA
Probable acriflavin resistance lipoprotein a precursor; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.650
RSc2726
Probable multidrug resistance transport transmembrane protein.
 
 
 0.620
RSp0819
Probable drug efflux lipoprotein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.582
RSp0440
Putative multidrug resistance homolog transmembrane protein.
 
 
 0.580
RSp0818
Probable drug efflux transmembrane protein.
 
   0.578
acrB
Putative acriflavin resistance transmembrane protein.
 
   0.577
mexC
Probable multidrug efflux system protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
   0.540
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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