STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cyoA2Probable transmembrane cytochrome o ubiquinol oxidase (subunit II) oxidoreductase protein. (330 aa)    
Predicted Functional Partners:
cyoB2
Probable transmembrane cytochrome o ubiquinol oxidase (subunitI oxidoreductase protein; Belongs to the heme-copper respiratory oxidase family.
 
 0.999
cyoC2
Probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein.
 
 0.999
cyoD2
Probable transmembrane cytochrome o ubiquinol oxidase (subunit iv) oxidoreductase protein.
 
 0.999
cyoD1
Probable transmembrane cytochrome o ubiquinol oxidase (subunit iv) oxidoreductase protein.
 
 
 0.974
cyoB1
Probable transmembrane cytochrome o ubiquinol oxidase (subunitI oxidoreductase protein; Belongs to the heme-copper respiratory oxidase family.
 
 0.974
cyoC1
Probable transmembrane cytochrome o ubiquinol oxidase (subunit III) oxidoreductase protein.
 
 0.972
nuoM
Probable transmembrane nadh dehydrogenaseI(chain m) oxidoreductase protein.
   
 0.918
nuoH
Probable transmembrane nadh dehydrogenaseI(chain h) oxidoreductase protein; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.
   
 0.918
cyoA1
Probable transmembrane cytochrome o ubiquinol oxidase (subunit II) oxidoreductase protein.
  
  
 
0.904
coxA
Probable cytochrome c oxidase polypeptideI(cytochrome aa3 subunit 1) transmembrane protein; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.
  
 0.892
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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