STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1881Hypothetical transmembrane protein. (504 aa)    
Predicted Functional Partners:
xdhB
Probable xanthine dehydrogenase (subunit b) oxidoreductase protein.
  
 
 0.918
RSc1888
Conserved hypothetical protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.
 
     0.913
xdhA
Putative xanthine dehydrogenase (subunit a) oxidoreductase protein.
    
  0.913
RSc1880
Probable transcription regulator protein; Belongs to the LysR transcriptional regulatory family.
 
     0.903
RSc1887
Putative esterase/lipase/thioesterase;acyl-coa thioester hydrolase protein.
 
     0.872
RSc3104
Probable calcium-binding signal peptide protein.
    
 
 0.845
dppA2
Probable periplasmic dipeptide transport protein precursor.
 
     0.784
dppB2
Probable dipeptide transmembrane abc transporter protein.
       0.773
dppC2
Probable dipeptide transmembrane abc transporter protein.
       0.773
dppD2
Probable oligopeptide atp-binding abc transporter protein; Belongs to the ABC transporter superfamily.
       0.773
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.