STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
iorA2Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein. (155 aa)    
Predicted Functional Partners:
iorB2
Probable transmembrane isoquinoline 1-oxidoreductase (beta subunit) oxidoreductase protein.
 
 0.986
RSc1468
Putative oxidoreductase molybdopterin-binding subunit, oxidoreductase protein.
 
 0.975
RSc0627
Putative dehydrogenase large chain transmembrane protein.
 
 0.946
xdhB
Probable xanthine dehydrogenase (subunit b) oxidoreductase protein.
 
     0.942
RSp0325
Probable dehydrogenase, large chain oxidoreductase protein.
 
 0.934
RSc1467
Probable dehydrogenase, oxidoreductase protein.
 
 0.891
RSc0628
Probable xanthine and co dehydrogenases maturation factor protein.
 
  
 0.802
RSc1463
Hypothetical protein of unknown function duf182.
 
  
 0.801
RSc2920
Putative hydroxamate-type ferrisiderophore receptor signal peptide protein.
   
    0.716
RSc2041
Urea transport system substrate-binding protein; Probable abc-type branched-chain amino acid transport systems, periplasmic component harboring a twin-arginine translocation pathway signal; abc transporter protein.
   
    0.705
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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