STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1898Probable phage-related protein. (902 aa)    
Predicted Functional Partners:
RSc1897
Probable prophage regulatory transcription regulator protein.
     
 0.780
RSc1939
Probable terminase (atpase subunit) related protein.
  
    0.775
RSc1941
Probable bacteriophage protein.
  
    0.775
RSc1937
Probable bacteriophage protein.
  
     0.774
RSc1940
Probable terminase (atpase subunit) related protein.
  
     0.774
RSc1936
Probable bacteriophage protein.
  
     0.772
RSc1938
Probable bacteriophage protein.
  
     0.772
RSc1935
Probable bacteriophage protein.
  
     0.770
RSc1913
Probable phage-related tail protein.
  
     0.750
RSc1918
Probable phage-related protein (tail sheath-like protein).
  
     0.750
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.