STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1907Putative dna-binding repressor transcription regulator protein. (173 aa)    
Predicted Functional Partners:
RSc1914
Probable phage-related tail transmembrane protein.
  
     0.668
RSc1917
Probable phage-related protein (major tail tube-like protein).
  
     0.569
RSc1925
Probable phage-related protein (baseplate assembly-like protein).
  
   
 0.565
RSc1931
Putative phage-related protein (hydrolase).
  
     0.548
RSc1906
Hypothetical ribbon-helix-helix domain harboring protein.
       0.544
RSc1898
Probable phage-related protein.
 
     0.543
RSc1912
Probable phage-related protein.
  
   
 0.520
RSc1918
Probable phage-related protein (tail sheath-like protein).
  
     0.517
RSc1913
Probable phage-related tail protein.
  
     0.499
RSc1939
Probable terminase (atpase subunit) related protein.
  
     0.464
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.