STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RSc1930Probable signal peptide protein. (166 aa)    
Predicted Functional Partners:
RSc1929
Probable tail completion-like protein.
       0.786
RSc1928
Probable tail completion-like protein.
       0.777
RSc1931
Putative phage-related protein (hydrolase).
       0.773
RSc1932
Putative phage-related transmembrane protein.
       0.773
RSc1933
Probable phage-related transmembrane protein.
       0.773
RSc1934
Probable bacteriophage protein.
       0.753
RSc1935
Probable bacteriophage protein.
       0.753
RSc1936
Probable bacteriophage protein.
       0.516
RSc1937
Probable bacteriophage protein.
       0.516
RSc1938
Probable bacteriophage protein.
       0.416
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.