STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1938Probable bacteriophage protein. (279 aa)    
Predicted Functional Partners:
RSc1937
Probable bacteriophage protein.
 
  
 0.993
RSc1936
Probable bacteriophage protein.
 
    0.992
RSc1940
Probable terminase (atpase subunit) related protein.
 
    0.990
RSc1941
Probable bacteriophage protein.
 
    0.990
RSc1935
Probable bacteriophage protein.
 
    0.988
RSc1934
Probable bacteriophage protein.
 
    0.987
RSc1913
Probable phage-related tail protein.
 
    0.977
RSc1928
Probable tail completion-like protein.
  
    0.949
RSc1929
Probable tail completion-like protein.
  
    0.949
RSc1916
Probable phage-related protein.
  
    0.912
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.