STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1960Putative transcriptional regulatory dna-binding transcription regulator protein. (118 aa)    
Predicted Functional Partners:
RSc1959
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.950
RSp1318
Putative transcription regulator protein.
  
     0.756
RSp1349
Putative transcription regulator protein.
  
     0.756
RSp0181
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
 
    0.633
gstF
Putative glutathione s-transferase transmembrane protein.
 
  
 0.515
RSc1961
Putative aaa atpase; protein.
       0.497
RSp1319
Probable cog3832, uncharacterized conserved protein.
 
    0.425
RSp1350
Probable cog3832, uncharacterized conserved protein.
 
    0.425
phnB
Putative glyoxalase/bleomycin resistance protein/dioxygenase.
 
    0.408
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.