STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
tonBProbable tonb transmembrane protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family. (221 aa)    
Predicted Functional Partners:
exbD1
Probable biopolymer transport transmembrane protein.
 
 
 0.992
exbB1
Probable biopolymer transport transmembrane protein.
 
 
 0.975
tolR
Putative tolr-related transport transmembrane protein.
  
 
 0.871
RSc2400
Probable tonb-dependent receptor protein.
 
 
 
 0.832
exbD2
Probable biopolymer transport exbd-related transmembrane protein.
 
 
 0.828
tolQ
Probable tolq-related transport transmembrane protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.751
tolB
Probable protein tolb precursor; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.738
RSc2729
Putative ferrichrome-iron receptor protein.
 
 
 0.735
RSp0244
Probable outer membrane hemin receptor signal peptide protein.
 
 
 0.733
RSp1271
Putative ferrisiderophore receptor protein.
 
 
 0.732
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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