STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcGProbable glcg protein. (137 aa)    
Predicted Functional Partners:
glcF
Probable glycolate oxidase (iron-sulfur subunit) protein.
 
  
 0.829
RSc1611
Hypothetical protein of unknown function duf224.
  
  
 0.691
RSc1968
Probable transmembrane protein.
       0.689
aceB
Probable malate synthase a (msa or masy protein); Belongs to the malate synthase family.
  
  
 0.548
glcE
Probable glycolate oxidase subunit oxidoreductase protein.
 
  
 0.531
cysC1
Probable adenylylsulfate kinase (aps kinase) protein; Catalyzes the synthesis of activated sulfate.
      
 0.527
cysC2
Probable adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate.
      
 0.527
cheZ1
Probable chemotaxis protein chez; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).
      
 0.471
RSc0454
Putative fe-s oxidoreductase fad/fmn-containing dehyfrogenase oxidoreductase protein.
  
  
 0.447
flhC
Probable flagellar transcriptional activator transcription regulator protein; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.
  
     0.411
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.