STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc1969Probable transmembrane protein. (106 aa)    
Predicted Functional Partners:
RSp1666
Probable signal peptide protein.
  
    0.520
RSc1970
Hypothetical protein; Miscellaneous; unknown.
       0.482
RSc2516
Osmoprotectant transport system permease protein; Putative abc type transporter : periplasmic glycine betaine / choline-binding lipoprotein and permease components transmembrane.
  
    0.448
RSc1968
Probable transmembrane protein.
       0.439
bfr
Probable bacterioferritin bfr (cytochrome b-1) (cytochrome b-557) protein; Iron-storage protein.
   
  
 0.426
osmB1
Putative osmotically inducible lipoprotein b1 transmembrane.
   
    0.418
osmB2
Putative osmotically inducible lipoprotein b2 transmembrane.
   
    0.418
RSc1584
Putative transcription regulator protein.
   
    0.404
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.