Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RSc2006 | RSc2007 | RSc2006 | RSc2007 | Probable extracellular solute-binding, family 5 abc transporter protein. | Probable lipoprotein transmembrane. | 0.493 |
| RSc2007 | RSc2006 | RSc2007 | RSc2006 | Probable lipoprotein transmembrane. | Probable extracellular solute-binding, family 5 abc transporter protein. | 0.493 |
| RSc2007 | dsbA1 | RSc2007 | RSc0285 | Probable lipoprotein transmembrane. | Probable thiol:disulfide interchange signal peptide protein. | 0.644 |
| RSc2007 | murI | RSc2007 | RSc1956 | Probable lipoprotein transmembrane. | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.536 |
| RSc2007 | purU1 | RSc2007 | RSc1873 | Probable lipoprotein transmembrane. | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.617 |
| RSc2007 | tatC | RSc2007 | RSc2940 | Probable lipoprotein transmembrane. | Putative sec-independent translocase protein tatc transmembrane; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.536 |
| RSc2007 | thiC | RSc2007 | RSc0113 | Probable lipoprotein transmembrane. | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.617 |
| dsbA1 | RSc2007 | RSc0285 | RSc2007 | Probable thiol:disulfide interchange signal peptide protein. | Probable lipoprotein transmembrane. | 0.644 |
| dsbA1 | murI | RSc0285 | RSc1956 | Probable thiol:disulfide interchange signal peptide protein. | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.536 |
| dsbA1 | tatC | RSc0285 | RSc2940 | Probable thiol:disulfide interchange signal peptide protein. | Putative sec-independent translocase protein tatc transmembrane; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.563 |
| murI | RSc2007 | RSc1956 | RSc2007 | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Probable lipoprotein transmembrane. | 0.536 |
| murI | dsbA1 | RSc1956 | RSc0285 | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Probable thiol:disulfide interchange signal peptide protein. | 0.536 |
| murI | purU1 | RSc1956 | RSc1873 | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | 0.550 |
| murI | tatC | RSc1956 | RSc2940 | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Putative sec-independent translocase protein tatc transmembrane; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.726 |
| murI | thiC | RSc1956 | RSc0113 | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.542 |
| purU1 | RSc2007 | RSc1873 | RSc2007 | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | Probable lipoprotein transmembrane. | 0.617 |
| purU1 | murI | RSc1873 | RSc1956 | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | Probable glutamate racemase protein; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.550 |
| purU1 | tatC | RSc1873 | RSc2940 | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | Putative sec-independent translocase protein tatc transmembrane; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | 0.524 |
| purU1 | thiC | RSc1873 | RSc0113 | Probable formyltetrahydrofolate deformylase protein; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4). | Thiamine biosynthesis protein thic thiamine biosynthesis; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. | 0.536 |
| tatC | RSc2007 | RSc2940 | RSc2007 | Putative sec-independent translocase protein tatc transmembrane; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides. | Probable lipoprotein transmembrane. | 0.536 |
page 1 of 2