Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
gstIProbable glutathione-s-transferase protein; Belongs to the GST superfamily. (230 aa)    
Predicted Functional Partners:
gstH
Probable glutathione s-transferase protein.
 
   
 0.865
gstL
Probable glutathione s-transferase protein.
  
   
 0.858
gstN
Probable glutathione s-transferase protein.
     
 0.851
gstF
Putative glutathione s-transferase transmembrane protein.
      
 0.830
gstA
Probable glutathione s-transferase protein.
 
  
 0.501
RSc2022
Putative isoprenylcysteine carboxyl methyltransferase transmembrane protein.
       0.486
lysS
Putative lysyl-trna synthetase (lysine--trna ligase) (lysrs) protein; Belongs to the class-II aminoacyl-tRNA synthetase family.
   
  0.478
RSc2020
Probable acyl-coa dehydrogenase oxidoreductase protein.
  
    0.478
RSc1544
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
  
   0.457
RSc2019
Putative phenylacetic acid degradation-related signal peptide protein.
   
   0.447
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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