STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2022Putative isoprenylcysteine carboxyl methyltransferase transmembrane protein. (219 aa)    
Predicted Functional Partners:
RSp0611
Probable transmembrane protein.
  
     0.567
RSc0835
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.535
RSc3235
Conserved hypothetical protein; Miscellaneous; hypothetical/global homology.
    
 0.535
RSc2023
Hypothetical protein; Miscellaneous; unknown.
       0.487
gstI
Probable glutathione-s-transferase protein; Belongs to the GST superfamily.
       0.486
RSp0712
Hypothetical protein of unknown function duf1326.
  
     0.485
RSp0803
Putative hemagglutinin-related signal peptide protein.
  
     0.465
RSp0902
Putative integrase/recombinase protein; Belongs to the 'phage' integrase family.
  
     0.464
RSc1400
Putative transmembrane protein.
  
     0.451
rpsM
Probable 30s ribosomal protein s13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.
   
    0.443
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.