STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Coexpression
Experiments
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[Homology]
Score
ureJProbable urease accessory urej transmembrane protein. (205 aa)    
Predicted Functional Partners:
ureG
Probable urease accessory protein; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.
  
  
 0.968
ureC
Probable urease (alpha subunit) protein; Belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
     
 0.964
ureB
Probable urease (beta subunit) protein; Belongs to the urease beta subunit family.
  
  
 0.959
ureE
Probable urease accessory protein uree; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.
 
  
 0.955
ureF
Probable urease accessory protein uref; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
  
 0.954
ureD
Probable urease accessory protein ured; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.
 
   
 0.938
ureA
Probable urease gamma subunit (urea amidohydrolase gamma subunit) protein; Belongs to the urease gamma subunit family.
     
 0.787
RSc2922
Putative outer membrane receptor signal peptide protein.
    
 0.670
risA
Two-component system, OmpR family, phosphate regulon response regulator OmpR; Probable oxidative stress resistance two-component response regulator transcription regulator protein.
      
 0.550
RSc2038
Probable atp-binding abc transporter protein.
     
 0.507
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.