STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2080Probable transmembrane protein. (283 aa)    
Predicted Functional Partners:
RSc2078
Probable rna polymerase sigma factor transcription regulator protein; Belongs to the sigma-70 factor family. ECF subfamily.
 
  
 0.960
RSc2079
Probable transmembrane protein.
       0.791
RSc1978
Probable transmembrane protein.
 
     0.726
RSc1397
Probable transmembrane protein; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.
  
     0.723
cobD-2
Putative cobalamin biosynthesis cobd-related transmembrane protein; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.
  
     0.695
otsB
Probable trehalose-phosphatase protein; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
   
    0.681
RSc2081
Probable transmembrane protein.
     
 0.644
RSc0299
Putative prolin-rich signal peptide protein.
  
     0.626
RSc1181
Probable cog1807, 4-amino-4-deoxy-l-arabinose transferase and related glycosyltransferases of pmt family transmembrane protein.
  
     0.620
RSc3098
Putative gcn5-related n-acetyltransferase; protein.
  
     0.612
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
Server load: low (26%) [HD]