STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2086Putative transcription regulator protein. (231 aa)    
Predicted Functional Partners:
RSc2087
Conserved hypothetical protein 730; Miscellaneous; hypothetical/global homology; Belongs to the LOG family.
       0.790
RSc1125
Putative hydrolase or acyltransferase (alpha/beta hydrolase superfamily) protein.
  
     0.668
RSc3098
Putative gcn5-related n-acetyltransferase; protein.
  
     0.548
RSc0299
Putative prolin-rich signal peptide protein.
  
     0.522
dgkA
Probable diacylglycerol kinase transmembrane protein; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.
  
    0.512
RSc2084
Putative glycosyl transferase, group 1 protein.
       0.509
RSc2383
Putative transmembrane protein.
 
     0.496
RSc0472
Putative transcription regulator protein.
  
     0.493
RSc2088
Putative exporter transmembrane protein.
       0.481
RSc1297
Probable pseudogene (sterol desaturase fragment) transmembrane protein.
  
     0.466
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.