STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhBProbable xanthine dehydrogenase (subunit b) oxidoreductase protein. (792 aa)    
Predicted Functional Partners:
xdhA
Putative xanthine dehydrogenase (subunit a) oxidoreductase protein.
 0.999
xdhC
Probable xanthine dehydrogenase protein.
 
 0.992
guaD
Probable guanine deaminase (guanine aminohydrolase) (gah) protein; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
 
 0.990
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Probable adenosine deaminase (adenosine aminohydrolase) protein; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.
 
  
 0.976
RSc1469
Probable oxidoreductase oxidoreductase protein.
 
     0.964
RSp0324
Probable dehydrogenase, small chain oxidoreductase protein.
 
     0.943
iorA2
Probable isoquinoline 1-oxidoreductase (alpha subunit) oxidoreductase protein.
 
     0.942
RSc0626
Probable aldehyde dehydrogenase (subunit III) oxidoreductase protein.
 
     0.941
RSc1881
Hypothetical transmembrane protein.
  
 
 0.913
RSc1629
Hypothetical protein of unknown function duf152; Belongs to the multicopper oxidase YfiH/RL5 family.
     
  0.900
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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