STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSc2104Probable amino-acid transmembrane abc transporter protein. (248 aa)    
Predicted Functional Partners:
RSc2106
Probable amino-acid atp-binding abc transporter protein.
 0.996
RSc2105
Probable amino-acid transmembrane abc transporter protein.
 
  
 
0.981
RSc2103
Probable amino-acid-binding periplasmic (pbp) abc transporter protein; Belongs to the bacterial solute-binding protein 3 family.
   0.953
RSp0481
Probable substrate-binding periplasmic (pbp) abc transporter protein; Belongs to the bacterial solute-binding protein 3 family.
   0.924
RSc3410
Probable amino acid-binding periplasmic (pbp) abc transporter protein.
   0.909
RSc3408
Probable atp-binding abc transporter protein.
 
 0.873
RSc2260
Probable amino-acid atp-binding abc transporter protein.
 
 0.868
RSp0479
Probable atp-binding abc transporter protein.
 
 0.868
RSp0932
Probable amino-acid atp-binding abc transporter protein.
 
 0.868
RSp0428
Putative pseudogene protein.
 
 
 0.863
Your Current Organism:
Ralstonia solanacearum
NCBI taxonomy Id: 267608
Other names: R. solanacearum GMI1000, Ralstonia solanacearum GMI1000, Ralstonia solanacearum str. GMI1000, Ralstonia solanacearum strain GMI1000
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.